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Table 1 Published DNA microarray experiments

From: DNA microarray data integration by ortholog gene analysis reveals potential molecular mechanisms of estrogen-dependent growth of human uterine fibroids

Species

Tissue

Chip Used

Sample Size

No of Genes Identified

References

Human

Uterine fibroids and normal myometrium

HG-U95A HuGeneFL

9 pairs

106a

[14]

  

HuGeneFL

7 pairs

68

[17]

  

HG-U133A

5 pairs

226b

[18]

Rat

Uteri from vehicle and estrogen treated animals

RG-U34A

5 rats per treatment, 2 chip for each animal

3927c

[15]

  1. a the authors reported 145 genes but only 106 accessions could be retrieved from the paper.
  2. b represents the number of the Affymetrix probe sets.
  3. c the probe sets were significant with false discovery rate < 0.05 by either one – day or five – week estrogen treatment of ovariectomized rats.