Table 2 Associations for the SNPs of TNFSF11, TNFRSF11A and TNFRSF11B genes with AAM and AANM
Gene | SNP | Allele | Function | HWE | MAF | AAM | AANM | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
Beta | P | P-Bonf | Beta | P | P-Bonf | ||||||
TNFRSF11B | rs1485286 | C/T | Intron | 0.4237 | T = 0.406 | 0.0697 | 0.49 | 1.00 | 0.2428 | 0.25 | 1.00 |
TNFRSF11B | rs11573869 | A/G | Intron | 0.8783 | G = 0.165 | −0.0529 | 0.69 | 1.00 | 0.1109 | 0.68 | 1.00 |
TNFRSF11B | rs3102728 | T/C | Intron | 0.2913 | C = 0.138 | 0.0726 | 0.61 | 1.00 | −0.2352 | 0.43 | 1.00 |
TNFRSF11B | rs11573819 | G/A | Intron | 0.9402 | A = 0.157 | 0.0501 | 0.71 | 1.00 | −0.1709 | 0.54 | 1.00 |
TNFRSF11B | rs2073618 | C/G | Asn by Lys | 0.5148 | G = 0.258 | −0.0065 | 0.95 | 1.00 | 0.2687 | 0.25 | 1.00 |
TNFRSF11B | rs2073617 | A/G | UTR-5 | 0.7887 | G = 0.382 | −0.1137 | 0.26 | 1.00 | 0.1741 | 0.41 | 1.00 |
TNFSF11 | rs9525641 | T/C | Intron | 0.1546 | C = 0.472 | 0.0810 | 0.42 | 1.00 | −0.0656 | 0.75 | 1.00 |
TNFSF11 | rs2277439 | A/G | Intron | 0.5905 | G = 0.295 | −0.0611 | 0.56 | 1.00 | 0.2430 | 0.27 | 1.00 |
TNFSF11 | rs2324851 | G/A | Intron | 0.6728 | A = 0.294 | −0.0699 | 0.51 | 1.00 | 0.2351 | 0.29 | 1.00 |
TNFSF11 | rs2875459 | C/T | Intron | 0.8542 | T = 0.220 | −0.1036 | 0.38 | 1.00 | −0.0189 | 0.94 | 1.00 |
TNFSF11 | rs2200287 | G/A | Intron | 0.8891 | A = 0.220 | −0.0898 | 0.44 | 1.00 | −0.0215 | 0.94 | 1.00 |
TNFSF11 | rs9533166 | T/C | Intron | 0.5125 | C = 0.131 | −0.1694 | 0.23 | 1.00 | −0.2154 | 0.47 | 1.00 |
TNFRSF11A | rs9962159 | A/G | Intron | 0.4172 | G = 0.435 | 0.1338 | 0.17 | 1.00 | −0.4434 | 0.03 | 0.57 |
TNFRSF11A | rs4603673 | C/G | Intron | 0.7190 | G = 0.162 | −0.1363 | 0.31 | 1.00 | −0.2551 | 0.36 | 1.00 |
TNFRSF11A | rs7239261 | C/A | Intron | 0.2342 | A = 0.239 | −0.1656 | 0.14 | 1.00 | 0.3123 | 0.18 | 1.00 |
TNFRSF11A | rs4500848 | C/T | Intron | 0.7267 | T = 0.262 | −0.3395 | <0.01 | 0.04 | −0.0378 | 0.87 | 1.00 |
TNFRSF11A | rs6567270 | T/A | Intron | 0.1116 | A = 0.408 | 0.2265 | 0.02 | 0.39 | 0.1197 | 0.55 | 1.00 |
TNFRSF11A | rs1805034 | T/C | Ala by Val | 0.3758 | C = 0.288 | −0.2790 | 0.01 | 0.22 | 0.0069 | 0.98 | 1.00 |
TNFRSF11A | rs4303637 | C/T | Intron | 0.9818 | C = 0.471 | 0.1618 | 0.10 | 1.00 | 0.0701 | 0.73 | 1.00 |
TNFRSF11A | rs4941131 | T/C | Intron | 0.8166 | C = 0.330 | 0.0437 | 0.67 | 1.00 | −0.1892 | 0.38 | 1.00 |
TNFRSF11A | rs9646629 | G/C | Intron | 0.2416 | C = 0.460 | 0.1461 | 0.14 | 1.00 | −0.2256 | 0.28 | 1.00 |