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Table 3 Subnetworks in PPI network

From: Identification of genes and pathways associated with menopausal status in breast cancer patients using two algorithms

Cluster

Score

Nodes

Edges

Genes

1

57.552

66

3856

FAM83D, MCM2, GINS1, CDC25C, POLQ, BUB1, TYMS, MCM4, CDK1, CDCA2, NDC80, CDCA5, KIF14, KIF23, SMC2, KIF4A, NCAPG, CHEK1, CDCA7, PRC1, FAM64A, CENPF, FANCI, PBK, DLGAP5, CKS2, AURKB, MND1, ATAD2, ESPL1, HMMR, ERCC6L, GMNN, KIF2C, CKAP2, FBXO5, MELK, MCM10, OIP5, CDCA8, RFC4, MYBL2, CCNB2, AURKA, CDC20, CENPN, TRIP13, UBE2C, ANLN, SKA1, TTK, NCAPH, NEK2, CDCA3, DSCC1, KIF15, NUF2, GTSE1, FEN1, BIRC5, EXO1, HJURP, CKS1B, DEPDC1, MCM7, FOXM1

2

5.571

13

78

LAMB3, SFN, MMP7, LAMA4, FGFR2, KRT14, UTRN, ACTA1, PECAM1, LAMC2, KDR, LAMA1, MET

3

5

7

40

WDR12, DDX17, BYSL, DDX21, NIP7, DDX49, EIF3B

4

4.947

18

94

H2BFS, HIST1H2BK, DSG3, PKP1, KRT6B, FOXA1, TRIM29, EED, WHSC1, KRT5, DSC3, CBFB, KLK7, WDR5, ELF5, YAP1, NANOG, IGF2BP3

5

4.8

14

72

RRP36, ISG20, CIRH1A, TRMT6, CTPS2, ABT1, EXOSC4, CTPS1, EXOSC3, RBM8A, EXOSC5, MAGOHB, UTP14A, ALYREF

6

4.571

13

64

CD36, FBN1, LEP, VCAN, FBLN1, ITGB5, FABP4, COL1A2, SLC27A6, PDK4, SPARC, TIMP3, PPARA

7

4.286

6

30

NUP155, RANBP2, NUP160, NUPL1, SEH1L, NUP205

8

4

6

28

MRPS35, MRPL9, SMKR1, MRPS2, MRPS12, MRPL15

9

2.4

4

12

CXCL16, CCL20, CXCL5, CXCL13

10

2.333

11

28

TIMM8A, TFR2, SLC39A8, TEFM, MTPAP, TAMM41, TOMM5, SLC40A1, LRPPRC, TIMM50, SLC25A37